Archive for the ‘Education’ Category

Open House: OSU Museum of Biological Diversity

Saturday, February 7th, 2009

This is a special winter opportunity for those living near Columbus, Ohio. It is a rare chance to see displays and the professional scientists who are spending their lives studying about the natural world, both past and present.I spent a few hours making the rounds and will share some of the insights while the memories are still fresh.

Darwin was a recurrent theme at many of the displays. It is the 150th anniversary of the publishing of the Origin of Species. Make sure to get hold of a copy of National Geographic from February 2009.

An ornithologist displayed birdcalls from warblers collected around western Washington and Oregon. Spectrograms were on display which showed the variation of frequency with time. We could press buttons to actually hear the call of males of the species. All of the calls start out the same, but different individuals have different trills at the end of their calls. The map showed the distribution of calls around the region. The males learn their calls from their fathers. The warblers migrate, but return to their home regions. The scientist mentioned that the females of this species are not selective about the particular call of the males they choose to mate with. This is probably good for biological diversity, though it does raise a question about how the geographical distribution of calls can be maintained.

Spectrogram of a Cardinal

Spectrogram of a Cardinal

Then we spoke to a scientist with recording equipment. My wife was recorded and we could study the time domain view as well as the spectrogram of her voice. We compared this to birds and other animals.

Next, we experienced arachnophobia as we examined live tarantulas and black widows as well as the preserved body of a brown recluse spider. We could see the red hour glass on the black widows and learned that they like to live in basements and sheds, places where the air is undisturbed. We then saw a preying mantiss devouring a cockroach.

We then viewed an amazing journey through gut of a mite. The camera view entered the mouth which had parallel ridges. Down the gullet we travelled through a seemingly endless labyrinth of channels. These images are taken from an actual mite using Synchotron-X-ray-Tomography. This technique allows 3-D reconstruction of structures lying below the surface at the submicron level.

We moved on to look at a microscopic protozoan that lives in pond water. It was magnified 100 times . It rotated around and around using antennae as paddles. We could see legs, two eggs, gills, and eyes. The scientist told us it was stuck in place on a bubble of air. (Damn that surface tension!)

Then I went into the fossil room. I saw something about the size of a head of cabbage. I guessed it was a stromatolite, one of the earilest forms of life on Earth. The scientst told me that it was a kind of sponge that still exists today. It is found in caves in the Carribean. Each layer consists of thousands of individuals living in a colony. They are not sure why there are cabbage leaf-like layers. Many periodicities are measured in the fossil record. Many times, paleontologists are at a loss to explain whether it is seasonal like tree rings or epochal like changes in ocean levels. One scientest did show that the number of days in a year used to be greater during the Devonian. Was this is because the rotational speed of the earth was greater or the orbit of the earth was different? That’s another question for next year.

I was extremely pleased to see a fossil from Caesar’s Creek. I recognized the it from a recent trip documented here. The scientist helped identify all the different kinds of animals. I learned that the lily-like crinoid was really an animal. The rock is indeed limestone.

Ordovician Fossils from Caesar Creek, Ohio

Ordovician Fossils from Caesar Creek, Ohio

Then Anne and I went into the insect room where our son, Jerry, has been an intern for the last two years. We saw the tiny scielionadea wasps that are almost too small to be seen without a magnifying glass. Jerry had to view them under a microscope to tell male from female. The undergrads and interns often mount the insects on paper, pins or clay, so that the more-experienced scientists can do further studies with microscopic cameras.

Anne Visits the Insect Lab

Anne Visits the Insect Lab

Doug and Shannon Visiting the Insect Lab

Doug and Shannon Visiting the Insect Lab

Jerry Holds Forth

Jerry Holds Forth

Insect Biologists

Insect Biologists

Sarah

Sarah

Entrance to Insect Lab

Entrance to Insect Lab

I then visited the plant DNA lab and saw three scientists describing the encoding of life I learned that each cell has almost 6 feet of DNA coiled up in the nucleus. The entire genome is encoded with paired nucleotides designated A, G, T, C. We compared different species of orchids and observed code substitutions. The scientist explained that some substitutions could change how the entire sequence is read, while other substitutions have a minor effect. All of the substitutions are subject to random changes. I asked for an example of how those sequence changes might cause a change in the form of a species. The scientist took in a big breath, and said, “That is the topic of my research. There are two phases of photosynthesis, a daytime and night time phase. I am studying a species whose genome has mutated so that the night time phase of photosynthesis does not work That gene is what is called a fossil gene. And yet the plant survives. It sends out chemical messages from its roots that causes another species of plant to provide essential nutrients.”

Back in the museum, I saw a video of a fresh water clam dangling a protrusion from its bivalve. A darter fish was attracted and actually bit off a small piece. The scientist explained that the continental US has more fresh water mollusk biological diversity than all the rest of the continents combined. However, they require fish to help spread their offspring. I agreed that it was fascinating to observe the many forms of life and the complex ways they find to survive and propagate. I was curious about who would fund the search for knowledge. The scientist explained that the fresh water mollusks were very sensitive to pollution. We risk losing them if we allow our streams and rivers to become polluted. In some cases a stream may have many adults of the species, but the population could still be in collapse if new generations of mollusks were not being produced. They often gather a gravid female and observe how it interacts with fish species in the lab. Then they know what to look for in nature. I asked if it would be possible to train non-scientists to take part in the monitoring of fresh water molusks in nature. He agreed it may be possible, but that it takes a special individual to go snorkeling in shallow rivers and streams to observe these interactions so essential to the preservation of the species.

I finished my tour in the horticultural room. I learned how plants are pressed and preserved. They use white glue like Elmer’s to glue the sample to paper. Large twigs can be sewn or taped. I observed a display entitled “Bark is a Many Splendored Thing”. It was used in many medicinal remedies down through the ages. Today, we take aspirin without thinking of where it originated. Then I got a nice lecture on the reproduction of ferns. I observed the disk shaped spots on the bottom of fern leaves. I could see numerous spores within the circle.

Plant Press

Plant Press

Reproductive Life of Ferns

Reproductive Life of Ferns

If you live nearby Columbus, Ohio and would like to find out more about the natural world, then make sure to make it to the open house next winter.

Obama’s Inaugural Address: One for the Ages?

Friday, January 23rd, 2009

At first I felt let down by Obama’s inaugural address. I showed it live in my Physics class and was overly concerned about the technical details like volume and lighting levels. It lacked the practiced rhythms of a stump speech which Obama would have had the chance to refine. He talked way too fast for my slow ears to hear what the author of this article was able to discern. That’s how history gets made. The significant ones, like the Gettysburg address, are lost on most listeners. After the speech my class discussed a solar energy physics problem. Everyone agreed that green collar jobs would help get our economy on track.

Imagine

Please take the time to read and discuss, before attending to those necessary “matters of consequence” which fill up our years.

The speech analysis:
http://www.dailykos.com/storyonly/2009/1/21/195515/922

Text and video of the speech:
http://news.yahoo.com/s/ap/20090120/ap_on_go_pr_wh/inauguration_obama_text

Here’s one of my favorites:

For everywhere we look, there is work to be done. The state of the economy calls for action, bold and swift, and we will act — not only to create new jobs, but to lay a new foundation for growth. We will build the roads and bridges, the electric grids and digital lines that feed our commerce and bind us together. We will restore science to its rightful place, and wield technology’s wonders to raise health care’s quality and lower its cost. We will harness the sun and the winds and the soil to fuel our cars and run our factories. And we will transform our schools and colleges and universities to meet the demands of a new age. All this we can do. All this we will do.

Now, there are some who question the scale of our ambitions — who suggest that our system cannot tolerate too many big plans. Their memories are short. For they have forgotten what this country has already done; what free men and women can achieve when imagination is joined to common purpose, and necessity to courage.

My Response to “The End of the Culture of the Book”

Thursday, January 22nd, 2009

A friend sent me the following:

Novelist, essayist and screenwriter Larry McMurtry makes a rare Houston speaking appearance Wednesday night when he delivers the 2009 Friends of Fondren Library Distinguished Guest Lecture.
Q: What will you talk about at Rice?
A:  The end of the culture of the book. I’m pessimistic. Mainly it’s the flow of people into my bookshop in Archer City. They’re almost always people over 40.

There are lots of high tech options for reading. I have enjoyed listening to books on tape, CD, and mp3. There are lots of classics in mp3 format on the Internet, that can be had for nothing. A long car ride is transformed by listening to stories involving dogs. I think I get more from reading at my own pace. I asked for a Kindle for my birthday. I have two nieces who both read. My younger son actually reads every book that is assigned. (Sadly, I did not when I was in school.)

It’s a question of culture. Sometimes, no matter how hard we try, a kid does not respond to a good example. However, it is well worth the effort, and most of them come around, if we are persistent enough. The persistence comes from an appreciation of what our parents did for us. And if we were ignored or maltreated, then living to be different from a bad example is almost as good as trying to live up to a good one. When kids are little, read to them until THEY are exhausted. Let them choose their favorites to be read again. You will make an indelible impression on them. Now that a grand daughter is due, we are digging out the old baby books. My younger son reads them in the same voice I used. For instance: Mike Mulligan’s Steamshovel read like Walter Cronkite. I would like to list kids books along with appropriate ages and suggestions for presentation. You cannot beat Chika-chika-boom for teaching rhythm and poetry to 2-year olds.

What goes around comes around. As I recovered in the hospital my son helped me get to sleep by reading a play out loud.

Believe me, I know it’s a struggle, but what else are we going to do for 10-30 years of retirement? You can see the universe in the pages of a book. I hope to read nearly everything Darwin, Twain, and Thoreau had to say. Then I will share the best with whomever will listen. I would like to retire and read more books in ten years than I read my whole life. A man named Garth Cate married my grandmother in the 1950’s. They were already over 60. Garth taught us to value reading and to think for ourselves. I’m hoping to be an elderly role-model in my turn. That is probably as big as goal as any I can think of.

Beautiful to Behold

Sunday, January 11th, 2009

We have a thin layer of ice on the branches this morning. Not enough to break anything, but beautiful to behold.

Ice on branches from yesterday

Ice on branches from January 10, 2009

Here’s a BBC article about the return of Pooh, the bear with very little brain, due out in Fall 2009.

Listen to the interview. The author hasn’t quite got the voices right. That calls for a real actor. Why not try out your acting chops with an appreciative young audience? It’s sure to please.

Oh, and here’s another book that may serve for interacting with the younger set. It is a boon to substitute teachers and anyone wishing to introduce science to young people.

Here’s the link to Science Friday where I heard an interview with the two authors. One is still in high school. THAT should inspire envy in us all.

Smart kids are one part nature and nine parts nurture.

A Summer of Science

Saturday, August 2nd, 2008

Jerry has been taking a six-week medical science course called Mechanisms of Human Health and Disease this summer at our local Children’s Hospital. One of the medical researchers is still young enough to remember what his education lacked. He wished he had more challenging courses in high school and contact with mentors. We have all heard that not enough young people are choosing science and medicine. Diseases such as cancer and AIDS are going to require fresh new perspectives from scientists who are not overly biased by old paradigms.
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Civil Rights Bus Trip March 25-29

Monday, March 31st, 2008

A bus went from Columbus to Atlanta, Birmingham, Tuskegee, Selma, Montgomery, Memphis and Cincinnati to visit museums and historical sites.

Mahatma Ghandi and Martin Luther King

The participants included 4 CAHS students who learned about the courage it took for Rosa Parks to not go to the back of the bus and for Civil Rights foot soldiers to face attack dogs and water cannon wielded by uniformed members of the police. They participated in a re-enactment of a slave market. They learned about the power of forgiveness and peaceful civil disobedience. This led to the end of Jim Crow laws and the tacit acceptance of domestic terror of the KKK.

Flickr slideshow (press “i” for Captions)

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Winter Vacation with Video Links

Saturday, March 15th, 2008

I took a trip to Maui to visit my brother. He has a tree trimming business. Besides helping with the trees, I got to meet some of his friends and the sights of Maui. Click on the links to see some short videos. Pictures can be found here.

On the first day we headed off to Kula to trim an avocado tree. All the branches were placed in the chipper. We dropped off the chips at Haiku Estates, a place where a friend of my brother is attempting to establish a traditional forest.

Truck and Chipper

On Monday, we were back at work trimming coconut trees. Monday March 3 was a windy day. It made it difficult to predict where coconuts would land. Any comment to the climber was answered with, “You better not stand under me!”

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First Specimen

Wednesday, November 14th, 2007

Hymenoptera

My son has an internship. He loves biology and has worked hard gathering insects, mounting them, and learning about the places they occupy in the web of life. Today he learned how to take highly focused images. He shared a photograph of this beautiful wasp. I hope to see many more such beautiful images.

“This is a lateral habitual image of the wasp, as if you were looking at its full body in nature.”

The November 8 Nature podcast (text) celebrates 100 years of Drosophila research with the theme “Hurah for the Humble Fruit Fly!”. Amongst other gems I learned a good joke:

“Time flies like an arrow, but fruit flies like bananas.” – Marx

Be sure to listen to Tanguy Chouard’s statement about the publishing of 10 new fruit fly genomes at 11:21 in the podcast.

Office 2007 Versus Open Office 2.3

Thursday, October 25th, 2007

I got a new laptop from work and it came with Office 2007. It has a new formats for doc, ppt, and xls files. The default format is XML based, so the file extensions have an ‘x’ added at the end. Of course these “x” files can’t be read by Office 2003. I changed my default to save in the old format. Trouble is that Office 2007 screws up the format for my Office 2003 files that have subscripts and superscripts. No amount of futzing will correct the problem. So I find myself forced to slowly convert everything to *.docx, *.pptx, and *.xlsx.

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Deciding Whether a Top Technical School is for You

Saturday, September 15th, 2007

The following was inspired by, 10 Lessons from an MIT Education.
The article is full of wisdom. When I was young, I was more hopeful than wise. I perceived older people’s “wisdom” as limitations on my freedom. However, I have grown to be thankful for those few threads I managed to weave into my life. My mom, my older brother Charles (place link to eventual blog here), and a guy named Garth Cate all had a big influence on me.

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